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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "Rminibwa" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'Rminibwa: Native R Bindings and SIMD Dispatch for ''minibwa'''
version: 0.4.0-0.0.1.9000
identifiers:
- type: url
  value: https://sounkou-bioinfo.github.io/Rminibwa/
abstract: Provides native R bindings to the 'minibwa' genomic read aligner with raw-vector
  query input, external-pointer alignment batches, ALTREP column views, and an installed
  C API for downstream packages. The package builds staged Single Instruction Multiple
  Data ('SIMD') KSW backends and selects portable scalar, SSE4, or AVX2 code at runtime
  without global instruction-set compiler flags.
authors:
- family-names: Toure
  given-names: Sounkou Mahamane
  email: sounkoutoure@gmail.com
repository: https://abiomix.r-universe.dev
repository-code: https://github.com/abiomix/abiomix-r-open
commit: dd82290ba296385fcc7d7dfed339886e9deb41a2
url: https://github.com/sounkou-bioinfo/Rminibwa
date-released: '2026-07-13'
contact:
- family-names: Toure
  given-names: Sounkou Mahamane
  email: sounkoutoure@gmail.com